Preservation of DNA in ancient Egyptian mummies

The presence of DNA has been demonstrated in the cell nuclei of an ancient Egyptian mummy fragment. When extracted, this DNA proved to be degraded to a considerable extent and chemically modified. However, the preservation of nucleic acids in this specimen suggests that applying recombinant DNA techniques to the study of ancient mummified tissues might prove to be a fruitful future area of research.     

Recovery and analysis of human genetic material from mummified tissue and bone

Using sensitive techniques of molecular biology, we have been able to demonstrate the presence of genomic material of human origin in samples of mummified human tissue and bone from selected archaeological sites in Greenland. This result has far-reaching consequences for both evolutionary and archaeological studies of past human populations.     

Cultural Resource Management and American Archaeology

Cultural resource management (CRM) work accounts for most of the archaeology conducted in the United States. A diverse and somewhat fragmented field, CRM has nonetheless achieved a degree of institutional and organizational maturity. CRM archaeology has produced important contributions to archaeological methodology and has established and refined knowledge of regional cultural-historical sequences and settlement and subsistence patterns. The current florescence of historical archaeology is attributable to CRM. Yet the maintenance of high quality in CRM is a pervasive and enduring problem. Academic institutions need to reestablish alliances with the CRM community. The future viability of CRM archaeology depends on factors both internal and external to the discipline: regulatory and statutory “reform,” agency funding levels, looting and other destructive forces, and Native American and other public involvement.     

An Approach to the Diagnosis of Craniofacial Fibrous Dysplasia from the 2500‐Year‐Old Remains of a Skull from Ancient China

A human skull, buried about 2500 years ago in a Bronze Age cemetery at Jinggouzi, a site of an important ethnic group in ancient China, appeared to have characteristics of fibrous dysplasia. The CT images indicated a reduction in bone density and relatively homogeneous lesions. More features were revealed using CT reconstruction techniques. Lesions seen in low‐magnification images using a 3D deep‐field microscope had an irregular honeycomb‐like structure. At higher magnification, the trabeculae morphology and the gaps between the trabeculae were irregular and varied in size and shape. Paraffin‐embedded specimens stained with HE showed trabeculae with tortuous irregular arrangements varying in shape and width. The irregular trabeculae of woven bone has been described as having fibrous dysplasia. Molecular analysis of the GNAS gene indicated no mutation. This provides a non‐invasive approach for us to make more comprehensive diagnoses and to assist research into ancient human diseases.     

The preservation of exposed mudbrick architecture in Karanis (Kom Aushim), Egypt

Excavations in the arid regions of Egypt provide insight into the many types and uses of mudbrick architecture. Upon exposure the inherently unstable building material decays rapidly, resulting in severe loss or complete destruction of once well-preserved buildings. The preservation of mudbrick structures is relatively complicated and expensive. Research has focused on the circumstances that enable preservation and the influence of climate and weather over time. Conservation treatments should address these two processes as soon as possible after exposure of the structures. Our assessment of a range of conservation methods leads to the conclusion that reburial is among the least objectionable method of preservation, despite its drawback of returning the excavated buildings to a situation where they are invisible to both researchers and the public.     

Ancient Microbial DNA in Dental Calculus: A New method for Studying Rapid Human Migration Events

Ancient human migrations provide the critical genetic background to historical and contemporary human demographic patterns. However, our ability to infer past human migration events, especially those that occurred over rapid timescales, is often limited. A key example is the peopling of Polynesia, where the timing is relatively well defined, but the exact routes taken during the final stages and the source populations are not. Here, we discuss the technical limitations of current methods for inferring rapid human migration events, using the final stages of Polynesian migration as an example. We also introduce a promising new proxy method to infer human migrations—patterns of bacterial evolution within ancient dental calculus (calcified plaque). While we focus on Polynesia, this method should be applicable to other past migrations, enhancing our understanding of human prehistory and revealing the crucial events that shaped it.     

The survival of PCR-amplifiable DNA in cow leather

We have investigated the survival of PCR-amplifiable mitochondrial and nuclear DNA in a small number of modern and medieval bovine leather samples. The results of this preliminary investigation demonstrate that, while no nuclear DNA can be PCR-amplified from any of the specimens, mitochondrial DNA can be amplified from all samples. To investigate this contrasting pattern of DNA survival further, we have vegetable-tanned cow skin in our own laboratory, and directly assayed the survival of PCR-amplifiable mitochondrial and nuclear DNA at each step of the process. The results indicate that nuclear DNA is reduced to sub-amplifiable levels as a result of the tanning baths, whereas amplifiable mitochondrial DNA survives the complete process. Our results suggest that old and archaeological bovine leather may represent a useful source of genetic information, although this information will most likely be limited to that which can be gained from mitochondrial DNA.     

The in situ preservation of archaeological remains: using lysimeters to assess the impacts of saturation and seasonality

Recent research has studied the effects of seasonal variability on waterlogged burial environments. In a new approach to the study of archaeological contexts, the use of controlled laboratory conditions via lysimeters has enabled new insights into the nature of short term fluctuations in saturation, and the impact that these can have on burial contexts. In addition, the protocols used have facilitated interesting insights into burial environments and the way in which fluctuations in saturation and seasonality can impact on the contained organic components within them.     

Are Teeth Better? Histological Characterization of Diagenesis in Archaeological Bone–Tooth Pairs and a Discussion of the Consequences for Archaeometric Sample Selection and Analyses

Teeth are often the preferred source material for isotopic and genetic assay involving ancient biomolecules. The assumption is that dental tissue preserves better due to its anatomically protected location, the enamel cap, and lower porosity compared to bone. However, this assumption has not been widely tested. Some similarities in diagenetic processes are to be expected due to similarities in structure and chemical composition of dentine and bone. This has led to the suggestion that bone can be used as an indicator of dental preservation, as a pre‐screening technique in the selection of suitable samples for biomolecular studies. Thus, direct testing of the correlation between bone and tooth preservation and diagenesis is needed. This paper reports the results of the histological characterization of diagenetic alterations within 25 human femur–tooth pairs, from a Medieval to modern (AD 1850) cemetery in Eindhoven, the Netherlands. The results showed that teeth do indeed preserve better overall, but not always, and that this was dependent on the main diagenetic factor(s) at the burial location. Furthermore, good correlations are found between the microstructural preservation of bone and teeth; similar processes of decay were observed within bone and teeth of the same individual. Overall, the study demonstrated that histological analysis of bone is useful for the identification of degradation processes that affect biomolecular preservation in skeletal material. In this way, sample selection and analytical strategies can be optimized. Copyright © 2013 John Wiley & Sons, Ltd.