Consilience of genetics and archaeobotany in the entangled history of rice

Major leaps forward in understanding rice both in genetics and archaeology have taken place in the past decade or so—with the publication of full draft genomes for indica and japonica rice, on the one hand, and with the spread of systematic flotation and increased recovery of archaeological spikelet bases and other rice remains on early sites in China, India and Southeast Asia. This paper will sketch a framework that coherently integrates the evidence from these burgeoning fields. This framework implies a reticulate framework in the phylogeny of early cultivated rice, with multiple starts of cultivation (two is perhaps not enough) but with the key consolidations of adaptations that must have been spread through hybridisation and therefore long-distance cultural contacts. Archaeobotanical evidence allows us to document the gradual evolutionary process of domestication through rice spikelet bases and grain size change. Separate trends in grain size change can be identified in India and China. The earliest centre of rice domestication was in the Yangtze basin of China, but a largely separate trajectory into rice cultivation can be traced in the Ganges plains of India. Intriguingly, contact-induced hybridisation is indicated for the early development of indica in northern India, ca. 2000 BC. An updated synthesis of the interwoven patterns of the spread of various rice varieties throughout Asia and to Madagascar can be suggested in which rice reached most of its historical range of important cultivation by the Iron Age.     

A Sealers Midden Provides Evidence a Live Pig (Sus scrofa) was Taken Ashore at Heard Island During the “Elephanting” Industry (1855–1882)

Livestock was often released onto remote Southern Ocean islands as a food source for shipwreck survivors during the industrial whaling and sealing era. Although animals were put ashore at nearby Isles Kerguelen and Crozet, the historical records make no mention of domesticated livestock ever being set ashore at Heard Island between 1855 and 1882. Here we report a pig (Sus scrofa) mandible discovered amongst other bones and artefacts in an ??elephanters?? midden found at Spit Bay, Heard Island. The find provides very strong evidence a live pig was shipped ashore and eaten as part of the sealers meagre provisions. Archaeological investigations of middens at other sealing locations could produce new insights into the dietary habits of these men.     

Assessing Post‐traumatic Time Interval in Human Dry Bone

The post‐traumatic status of antemortem fractures in human dry bone remains is currently defined as being either ‘healing’ or ‘healed’. However, detailed ‘dating’ of the related post‐traumatic time interval would be desirable, since it would aid in assessing individual medical status and care at the time of death. Within forensic pathology practice, fresh tissue healing phases are routinely used as an intrinsic parameter for the length of the post‐traumatic time interval. Unfortunately, the direct application of such a method is hampered when applied to dry bone skeletal material. This study explores the possibility of applying a fracture dating system, drawn forth from the traditional forensic pathology method, on dry bone remains. More specifically, the aim is to establish the extent to which various histomorphological features indicative of specific time intervals of healing are consistently detectable. Human dry bones with fractures and amputations in various phases of healing were studied. Results show that the complementary use of radiological and histological investigation techniques improves the differentiation between various healing phases and thus allow for a more detailed dating of lesions. For future use, healing features that have proven to be consistently detectable and their related post traumatic time intervals are listed. The system aids in demarcating a considerably more ‘narrow’ post‐traumatic time interval than usual. Copyright © 2012 John Wiley & Sons, Ltd.     

Decision-Making on Transport Infrastructure and Contested Information: A Critical Analysis of Three Approaches

Information is highly contested in virtually all decision-making processes on large infrastructure projects, leading to the delay or cancellation of projects. Contested information has two characteristics: uncertainty and ambiguity. The uncertainty of information refers to the lack of reliable knowledge about the characteristics and future effects of infrastructure projects. The ambiguity of information means that different actors have different (legitimate and valid) perspectives on the characteristics and effects of infrastructure projects. Information is contested if both uncertainty and ambiguity apply. In this paper, we develop a theoretical framework based on different perspectives on rationality and the role ascribed to information in decision-making. We then use this framework to analyse three approaches aiming to deal with the contested nature of information. The analysis shows that none of the approaches can fully deal with the contested nature of information, because no practically feasible approach has yet been developed to effectively address the ambiguity of information. We end with a brief discussion of the possible responses to this finding.     

BAYESIAN MODEL AVERAGING IN THE CONTEXT OF SPATIAL HEDONIC PRICING: AN APPLICATION TO FARMLAND VALUES

ABSTRACT Specification uncertainty arises in spatial hedonic pricing models because economic theory provides no guide in choosing the spatial weighting matrix and explanatory variables. Our objective in this paper is to investigate whether we can resolve uncertainty in the application of a spatial hedonic pricing model. We employ Bayesian Model Averaging in combination with Markov Chain, Monte Carlo Model Composition. The proposed methodology provides inclusion probabilities for explanatory variables and weighting matrices. These probabilities provide a clear indication of which explanatory variables and weighting matrices are most relevant, but they are case specific.     

Assessing the effects of geomorphological processes on archaeological densities: a GIS case study on Zakynthos Island,Greece

While geomorphological processes are considered key factors in the distribution of archaeological surface finds, few studies have attempted to quantify the relationship between artefact dispersal and erosional/depositional patterns. This paper compares Unit Stream Power Erosion Deposition model (USPED) and Revised Universal Soil Loss Equation (RUSLE) and integrates the results in the archaeological finds’ density map of Zakynthos Archaeological Project. The study area (Palaiokastro), with artefacts dated from middle Paleolithic to medieval times, includes a steep terrain with a surrounding plain area, where the downslope erosion has considerably modified the distribution of archaeological remains. Through this study, it is possible to identify relationships between high artefact densities and stable/non-eroded surfaces, and on the other hand, low densities and eroded surfaces. However, the results indicate a degree of spatial variability, which modifies the predicted relationship. The consideration of the effects of these temporal and spatial patterns is crucial for developing effective sampling methods and accurately interpreting the archaeological record.     

Whatever Happened to Industry Policy in Australia?

Since the 1980s and early 1990s, there have been few constructive developments towards a comprehensive and coherent productivity-enhancing agenda. Labor governments have often provided rhetorical support but have fought over whether industry policy represents a new protectionism or market-enhancing development policy. The Coalition in opposition and in office has generally opposed the idea of industry policy, but has continued to support ad hoc and costly policy interventions. Australia's 20 years without a recession has disguised the need to reconsider industry policy and questions of economic diversity. This article argues that dealing with problems of economic structure – particularly resource dependence and climate change adaptation – requires a revitalisation of the industry policy debate. It tracks the theory and practice of industry policy in Australia and concludes that advocates for industry policy must formulate new policy ideas outside the framework of the traditional divide between intervention and free markets.     

Fish ’n chips: ZooMS peptide mass fingerprinting in a 96 well plate format to identify fish bone fragments

Fish are a large, highly diverse, and anthropologically important group of vertebrates. However, fish bones are underrepresented in the archaeological literature because they are less stable than those of other taxa and identification of bone to species is often difficult or impossible. We explore a new identification system, ZooMS (Zooarchaeology by Mass Spectrometry), which is based upon protein barcoding. As proteins can be cleaved enzymatically and analyzed by mass spectrometry in a repeatable way, protein barcoding is used widely in microbiological contexts for quick and inexpensive protein identification; mass spectra reflect the differences in protein sequence and can therefore be reproducibly linked to a particular protein or protein fragment. ZooMS uses peptide fingerprinting of bone collagen as a method for rapid identification of archaeological bone. This has involved the identification of masses related to peptides of known sequence. For mammals, sufficient sequence information is available for this approach but for groups, such the teleost fish, species are highly diverse and there are few available collagen sequences. Here we report a preliminary investigation into the identification of fish species by peptide mass fingerprinting that does not require sequence information. Collagen mass spectra are used to identify eight species of bony fishes (Osteichthyes) from four orders: Clupeiformes, Salmoniformes, Gadiformes, and Perciformes. The method is applied to both modern and archaeological fish remains and offers the capacity to identify traditionally unidentifiable fish fragments, thus increasing the Number of Identified Specimens (NISP) and providing invaluable information in specialized contexts.