Early Neolithic pig domestication at Jiahu,Henan Province,China: clues from molar shape analyses using geometric morphometric approaches

The zooarchaeology of pig domestication in China is a challenging task due to its wild boar ancestors being widespread throughout Eurasia. However using geometric morphometric approaches on molar tooth (M₂), shape and size variations, from modern and Neolithic suids, using Yangshao pigs as a surrogate for the Neolithic domestic form, we have addressed the identification of morphological change during the early step of domestication in three early Neolithic sites where claims of pig domestication have been made. Phenetic relationships here have revealed clear and interpretable phenotypic signatures in the samples of modern and Neolithic pigs; which provide evidence for pig domestication at the site of Jiahu from at least 6600 BC cal., re-establishing the Yellow River region as one of the earliest centre of independent Chinese pig domestication.     

Distinguishing Wild Boar from Domestic Pigs in Prehistory: A Review of Approaches and Recent Results

New methods permit archaeologists to distinguish between wild boar and domestic pigs with greater confidence than has been hitherto possible. Metrical methods are the most commonly used; these are reviewed. Assemblages containing a wider range of measurements (as measured by the coefficient of variation [V]) than is found in one population suggest that two populations of different-sized pigs were present, probably indicating separate wild and domestic populations with little or no interbreeding. These assemblages, sometimes taken to indicate animals ‘intermediate’ between wild and domestic, are clear evidence of full domestication. Other traditional means of diagnosing domestication based on age at death (the killing of many young animals) and biogeography (the export of the animal beyond its natural range, especially to islands) are particularly problematic when applied to pigs. New methods include the frequency of Linear Enamel Hypoplasia, which may increase due to domestication-induced stress, the study of diet through isotopes and dental microwear, and the examination of population histories through ancient and modern DNA and geometric morphometrics. These are all promising but should not be considered in isolation: many problems remain.     

Identifying donkey domestication through changes in cross-sectional geometry of long bones

The initial phases of donkey domestication are difficult to identify in the archaeological record due to late and inconsistent changes in morphology and body size in the earliest domestics. Use of donkeys for load carrying and the management of captive herds resulted in a distinctive behavioral shift away from the free-ranging speed and mobility characteristic of wild asses toward slower, more steady pacing. Given the ability of bone to adapt to its mechanical environment, bone remodeling in the limbs of wild asses and donkeys are evaluated using cross-sectional geometry to determine whether weight bearing or locomotor differences between the wild and domestic forms may be used to recognize early domestication. Cross-sectional data were collected on the humeri, radii, metacarpals and metatarsals of eight wild ass and six donkey skeletons. Wild ass forelimbs have greater overall strength and more cylindrical humeral diaphyses, indicating better resistance to a varied locomotor repertoire. These results demonstrate that analyses of shaft geometry can provide information on changes in locomotor behavior during domestication. Our finding that shifts in gait had greater effects on the morphology of early domestic donkeys than did load-carrying places a new emphasis on understanding selection for gait changes in domestication dynamics.     

Shape Change and Variation in the Cranial Morphology of Wild Canids (Canis lupus,Canis latrans,Canis rufus) Compared to Domestic Dogs (Canis familiaris) Using Geometric Morphometrics

Wild canid populations exhibit different anatomical morphologies compared to domesticated dogs in North America. This is particularly important concerning archaeological sites, which may contain early domesticated species, for the proper identification of osteological remains. Previous studies have indicated domestic dogs exhibit a shorter rostrum accompanied by a crowded tooth row; however, none describe the overall complexity of these changes. Consequently, using a landmark‐based geometric morphometric analysis, cranial morphological characteristics were examined in North American wild canids: the gray wolf (Canis lupus), coyote (Canis latrans), red wolf (Canis rufus), and the domestic dog (Canis familiaris). The shape and size of the cranium in lateral and ventral views were compared between the three wild species to the group of domesticated dogs. Wild canids clustered separately from the domestic group in all statistical analyses. Results indicate an expansion of the orbital region, a compression of the rostrum, and an overall warping in the shape and orientation of the skull. In domestic species, there is also a downward shift in the frontal portion of the skull accompanied by the braincase assuming a more upward position. This technique successfully depicted how slight changes in isolated areas of the cranium can have an impact on the overall shape and morphology of the skull. We presume these changes in cranial anatomy reflect the recent selective pressures domestic dogs have undergone since diverging from their wild ancestors. Copyright © 2012 John Wiley & Sons, Ltd.     

关于中国稻作起源证据的讨论与商榷

本文是对傅稻镰等人最近的文章批评中国栽培水稻起源研究缺乏证据、提出长江下游水稻栽培开始于公元前4000年这一观点一文的回应。我们首先考察中国从野生稻采集到水稻栽培过程研究的相关文献．进而从水稻形态学和考古学的角度对早期水稻遗存加以研究。讨论集中在以下三个方面：长江流域最早水稻栽培的时间：长江下游和淮河流域初期栽培水稻的遗存;考古遗存所见水稻粒形态大小变化的意义。我们也考察了傅文用来区分野生水稻和栽培水稻的几个标准：考古纪录中所见的未成熟稻遗存、水稻粒的增大和水稻粒的形态。根据已经发表的资料和我们对水稻的研究,我们认为到全新世早期（距今9000年前后）,南北中国的新石器时代居民就可能已经收获野生稻并开始水稻栽培了。     

Advances in Morphometrics in Archaeobotany

ABSTRACT

Morphometric analysis offers an alternative or augmentation to traditional archaeobotanical methods to address differences within and between plant species and their remains, refining and enhancing taxonomic resolution. Morphometrics, the measurement of size and shape, and the multivariate statistical analysis of generated quantitative variables, have long played a major role in biological research, including plant taxonomy and systematics, although its application in archaeobotany is relatively recent. Over the last few decades, there has been an increasing interest in the use of morphometrics for analysing a varied range of archaeological plant materials (mainly seeds, pollen, phytoliths, and starch grains). In particular, morphometrics have contributed to the study of the domestication and spread of many cereals world-wide, as well as that of other taxa including legumes, underground storage organs (USO), and fruits (such as olives, grapes, and dates). This paper reviews current methodologies, recent applications, and advances in the use of morphometrics in archaeobotanical research, discusses its role in exploring major research questions, and suggests possible future directions for its use.     

Ancient DNA reveals a major genetic change during the transition from hunting economy to reindeer husbandry in northern Scandinavia

The timing and origin of reindeer domestication has been highly debated. Recent molecular analyses show several mitochondrial lineages of domestic reindeer across Eurasia suggesting different origins of Fennoscandian and Siberian domestic reindeer. In order to investigate the origin of domestic Fennoscandian reindeer, we sequenced a mitochondrial control region fragment of 68 ancient reindeer remains from archaeological sites in Finnmark, the major county for extant reindeer husbandry in Norway, spanning from ca. BC 3400 to AD 1800. The majority of the Stone and Iron Age reindeer assemblages in Finnmark are from settlements in the eastern part of the county, in the Varangerfjord area. The reindeer remains from these settlements show affiliation to the large and complex Beringian haplotype cluster, found in extant reindeer from the Kola Peninsula to north-eastern Russia. A distinct haplotype shift is observed in the late medieval period, when the typical haplotype signatures of extant domestic Fennoscandian reindeer appeared in coastal regions of both eastern and western Finnmark. These haplotypes were not found among the Stone and Iron Age wild reindeer samples of Finnmark, suggesting that this population was not ancestral to extant domestic reindeer of Fennoscandia.     

Morphometric Analysis of Sus Remains from Neolithic Sites in the Wei River Valley,China, with Implications for Domestication

Size variation of Sus remains within and between sites is examined for the Neolithic sites in the Wei River valley in China. The coefficient of variation [V] for pig measurements at the sites of Wayaogou, Quanhucun and Jiangzhai was calculated, and we observed patterns that show evidence of two populations of different‐size pigs, supporting the likelihood that both wild and domestic pigs were present. Also, size reduction of pigs can be traced within the Neolithic‐early Bronze Age archaeo‐faunal sequence of the Wei River valley. This size reduction was accompanied by an increase of coefficients of variation through the Neolithic. Both of these trends were probably the consequences of pig domestication, and the morphometric differences probably provide evidence for the different stages of pig domestication in this region. Copyright © 2013 John Wiley & Sons, Ltd.     

First evidence of Equus asinus L. in the Chalcolithic disputes the Phoenicians as the first to introduce donkeys into the Iberian Peninsula

Two equid species have been documented in the Pleistocene of the Iberian Peninsula, the horse Equus caballus, and the Eurasian hemione Equus hydruntinus. While the former survived the Holocene–Pleistocene until now, the timing for the extinction of the latter is unclear. Scarce, fragmented archaeological remains assess the presence of small equids living in the Holocene of Iberia. Those could possibly correspond to the Eurasian hemione although unambiguous morphological identification is often not possible. With the find of an equid tooth from Leceia, a Chalcolithic fortified site in Portugal, and using both morphological and mitochondrial genome analyses, we demonstrate for the first time the presence of a new equid species in Holocene Iberia, namely a donkey (Equus asinus). Radiocarbon dating of the tooth to Cal 2340–2130, and 2080–2060 BC with 95% probability, demonstrates that donkeys were present in Iberia well before the arrival of Phoenicians in the first quarter of the first millennium BC (900–750 years BC), which were considered so far as the first who introduced donkeys in the region.     

Morphological,chemical and physical changes during charcoalification of wood and its relevance to archaeological contexts

Wood exposed to a heat source can be transformed into charcoal if subject to conditions of carbonisation (in the absence of air) or charring (in restricted air). Charcoal recovered from archaeological sites can yield fundamental information to our understanding of human economic and cultural development over time and (ecological) setting. This work describes the morphological (anatomy, degree of shrinkage), physical (reflectance) and chemical (elemental, molecular composition) properties of charcoal in relation to heat source and wood variables. In this study charcoal and charcoal fuel were experimentally produced whereby temperature (160–1200 °C), time of exposure (2–1440 min), heating rate (high and low) and wood type (angiosperm and conifer) were varied. The results show that charcoal, often described as an inert, black material, has different chemical and physical properties in relation to the investigated variables. By using these different properties it is possible to distinguish between the different types of fires (domestic and industrial) exploited by humans in the past. Morphological analyses and reflectance measurements are effective tools for this purpose and can be used in wood exposed to temperatures of 300 °C and above—temperatures which are relevant to archaeological research. Angiosperm and conifer wood react in different ways when exposed to heat and thus the taxonomic identity of archaeological material needs to be known. Chemical analyses can be used for wood exposed to temperatures below 400 °C whereas elemental analyses of the carbon content can be used for wood exposed to temperatures up to a maximum of 650 °C.     

First Approach to Study the Presence of Domesticated Camelids (Lama glama) in the Chaco‐Santiago Region,a Marginal Zone of the South Central Andes

We analysed bone remains of camelids from the Maquijata site, assigned to the late pottery‐making and farming stage (ca. 800–400 BP), in order to differentiate between domestic and wild species in the Chaco‐Santiago archaeological region. This region is considered marginal to the Argentine Northwest regarding its cultural development and has received less attention than other regions. South American camelids have been one of the major resources in this continent, with domestication recorded in the South Central Andes at around 4400–3000 BP. We applied osteometric techniques and multivariate statistical analyses to proximal phalanges; the results showed interspecific differentiation of archaeological specimens, though with some methodological application issues. These results are the first contribution regarding the presence of domesticated animals in the study area. Copyright © 2012 John Wiley & Sons, Ltd.     

Biometric Differentiation of Wild Philippine Pigs from Introduced Sus scrofa in Modern and Archaeological Assemblages

In many parts of Eurasia, the Middle East and Southeast Asia where native wild suids occur, it is notoriously difficult to differentiate these from introduced domestic pigs in the prehistoric archaeological record. Yet, correct identification of the initial appearance or introduction of domestic pigs (Sus scrofa ) is essential for determining the timing for the transition from purely hunting to the adoption of managed animal populations within different regions across the globe. In a recent review of techniques used by zooarchaeologists to distinguish between domestic and wild pig populations, the analysts concluded that the most reliable method was metrical analyses, when the data produce a clear two‐population pattern, one domestic, the other wild. In this study, we demonstrate how linear metrics are an effective tool, albeit at different levels of confidence, for differentiating the native and endemic species of Philippine pig from S. scrofa , both within modern contemporary assemblages, and the archaeological record. Copyright © 2017 John Wiley & Sons, Ltd.     

New evidence for Upper Palaeolithic small domestic dogs in South-Western Europe

Osteoarchaeology and genetics agree that the earliest dog domestications took place during the Upper Palaeolithic. However, they partially disagree about the process of domestication. The former indicated multiple origins, when some of the results of the latter suggested that dogs mainly came from a Chinese centre of domestication. In this study, we describe and discuss new evidence for Late Glacial small dogs in the South-West (Pont d’Ambon and Montespan) and North of France (Le Closeau). Special attention was paid to the possibility of miss-identification between small early dogs and dholes (Cuon alpinus), a middle-sized Canidae, the size of which can be similar to early small dogs. Detailed analyses of the archaeological contexts alongside that of taphonomy, morphoscopy, morphometry and pathology, identified 49 small canid remains from the three sites. They allowed us to exclude the presence of dholes and to conclude that they were all small Upper Paleolithic dogs. These, together with other more sparse discoveries, confirmed the presence of Western European Upper Paleolithic Small (WEUPS) dogs from, at least, the Middle Magdalenian to the end of the Epipaleolithic (i.e. 15,000–11,500 cal BP). As they are contemporaneous with the much larger Russian Upper Paleolithic dogs, they plea for several Euro-Asian origins for Late Palaeolithic dogs.     

Quantifying Ship Shape in Archaeology: Evaluating 3D Geometric Morphometrics

The analysis of the archaeological remains of ships and boats, in particular hull shapes, have been central to wider analysis of performance, function, and significance within past societies. This article reviews established methods of quantifying shape in ship and boat archaeology—linear measurement ratios and form coefficients—and evaluates the utility of 3D geometric morphometrics (GM). The 3D shape of 30 vessels from north‐west Europe dating between 325 BC and AD 1915 are quantified to study how hull shape relates to a vessel's function and intended operating environment. A comparison of the three methods highlights the importance of analysing the complexity of a hull in a holistic manner and demonstrates that 3D GM outperforms the traditional methods.     

Evolving ecosystems: ecological data from an Iron Age small mammal accumulation at Alorda Park (Catalonia,Spain)

Small mammals are considered to be good indicators of ancient environments. One particular layer in a fortification tower of a Mediterranean Iberian village, Alorda Park (4th century BC), provided a large amount of well-preserved small mammal bones (about 19,200 remains) probably accumulated by barn owls (Tyto alba). Such an accumulation is rarely available from the Iron Age. It provides not only palaeoenvironmental data, but also further information about other studies such as morphometrics, ancient DNA and zoogeography. This article focuses on the ecological data, and attempts to develop an accurate taphonomic study to assess the reliability and statistical significance of this archaeological sample.     

Geometric morphometrics and the population diversity of Late Glacial horses in Western Europe (Equus caballus arcelini): phylogeographic and anthropological implications

In order to test the possibility of large migrations of wild horses between the North and the South of Western Europe during the Late Glacial, we addressed the population diversity in this area, especially during the Bölling/Alleröd periods. We based this appreciation upon the detailed morphology of the distal part of the metapodials. Landmark approaches were applied to archaeological and palaeontological samples from three distinct areas: Switzerland Plateau, Paris Basin, and Charente (France). Little differences of isometric size characterized the three regional samples. Multivariate analyses of shape (principal component analysis, discriminant, canonical variates and neural network analyses) revealed similar sets of complex shape features on both metacarpals and metatarsals. In addition, regional groups appeared clearly differentiated by well defined shape patterns, the functional implications of which remain to be established. These results evidence the existence of a regional structuration of populations (particularly clear on the CVA of both metacarpals and metatarsals) suggesting the absence of long distance migrations. Finally, it appears that the distinction between size and shape systematically operated by geometric morphometrics can provide better insights into the study of the mobility of ancient populations. Geometric morphometrics approaches such as 3D Procrustes superimpositions, appear therefore to be of great interest for archaeological purposes.     

Pig exploitation in the southern Kanto region,Japan

This study investigates changes in past human and animal relationships by focusing on pig (Sus scrofa) remains excavated from archaeological sites in southern Kanto, Japan. Pigs and humans have had a close relationship since prehistoric times and the process of change in this relationship, including possible domestication, is one of the major issues in Japanese zooarchaeology. This study attempts to gain a better understanding of the nature of past interaction between humans and pigs by investigating their relative importance compared with other vertebrate remains, kill‐off patterns, and changes in their size and shape at these sites. The materials used for this study date from the Earliest to Final Jomon (ca. 10,000–2500 BP), Yayoi (ca. 2500–1700 BP) and Kofun (ca. 1700–1300 BP) periods. The relative proportions of pigs were calculated to show the overall trend of pig exploitation in each site. Age at death was obtained based on the state of tooth eruption. Bucco‐lingual crown measurements were taken on the third and fourth premolars and on each cusp of the first and second molars of the mandible, and the logarithmic ratio technique was then applied to these data. The age structure of Sus varies between different sites in the Jomon Period, and significant changes were observed in the Yayoi and Kofun Periods. A decrease in the relative proportion of pigs in the faunal assemblages was observed from Jomon to Kofun. Three major differences were observed in the size of pigs. The overall size of pigs significantly increased from Early to Middle Jomon, whilst a decrease in size occurred in the Yayoi Period. Finally, overall size increased significantly during the Kofun Period. Together with the archaeological evidence—such as the ritual burial of pigs accompanying human burial—we suggest that the interaction between pigs and humans became gradually stronger at some sites during the Late Jomon Period, and the relationship intensified in the Yayoi Period. Copyright © 2006 John Wiley & Sons, Ltd.     

从龙虬庄遗址个案看史前家猪饲养与农业发展的相关性

一般而言,农业的发展会促进家猪饲养业的相应发展,但龙虬庄遗址个案研究则展示了另一种相关性。该遗址周围相对丰富的野生动物资源在弱化人们对家猪饲养的依赖方面扮演了重要角色,这从更深的层次上印证了家畜饲养的被动发展的本质。龙虬庄遗址个案还显示了较强的区域代表意义。     

DNA analysis of archaeological sheep remains from China

Recent research has thrown considerable light on the history of the domestic sheep, but has not extended to ancient sheep specimens. In the present study, ancient DNA analysis was carried out on eight archaeological sheep remains recovered from Erlitou archaeological site in Henan Province (ca. 2100–1800 B.C.) to explore the genetic structure of ancient sheep and the phylogenetic relationship between ancient and modern sheep. We analyzed the control region sequences and coding regions of mitochondrial DNA from the remains by direct sequencing and restriction fragment length polymorphism analysis, respectively. Our results reveal that all ancient sheep belong to lineage A defined by modern sheep sequences. Phylogenetic analysis shows that neither argali (Ovis ammon) nor urial (Ovis vignei) mtDNA is closely related to Erlitou ancient sheep. In addition, our results suggest that ancient DNA analysis can serve as a powerful tool in tracing prehistoric population movement.     

陕北靖边五庄果墚动物遗存及古环境分析

五庄果墚遗址位于陕西省靖边县黄蒿界乡小界村西北,距离靖边县城约30公里.遗址面积约30万平方米以上,现为省级文物保护单位.