Modern human,early modern human and Neanderthal limb proportions

The limb proportions of 686 subjects (461 men and 225 women) from five ethnic groups (White, Inuit, Gurkha, Bantu, San) have been compared. Stature, limb and skeletal measurements were taken directly from the subjects by one observer. The brachial and crural indices of the Whites were markedly smaller (lower) than those of the other populations. The crural indices of the Inuit were similar to those of the two African populations, but this may be an artefact from relatively small numbers for the Inuit population. There is no sexual dimorphism for the brachial index, but men have larger (higher) crural indices than women, a finding which probably relates to the relatively broad pelvises and consequently long femurs of women. The two African populations have long limb lengths standardized for height compared to the Gurkha and Inuit populations, with the Whites intermediate. This finding is consistent with Bergmann's thermoregulatory rule. The correlations between distal abbreviation and limb abbreviation for both the upper and lower limbs are poor and negative. Relatively long limbs tend to have smaller distal segments than relatively short limbs and for the legs this may constitute a safeguard for the integrity of the medial and cruciate ligaments of the knee. For these five modern populations distal abbreviation cannot be used as a proxy for limb abbreviation and there is no justification for linking distal abbreviation with climatic selection. Skeletal data relating to nine Neanderthal and 25 early modern humans have also been analysed. The analysis confirms marked limb and distal abbreviation for the Neanderthals compared to early and contemporary modern humans, but this conclusion presupposes that the taxonomic classes are correct and that limb proportions were not used originally as a class discriminant. For these archaic populations there is a moderate positive correlation between lower limb abbreviation and distal abbreviation, but the numbers are small and the confidence intervals very wide. In view of the findings for modern populations, and until more relevant fossils are available, it is probably unwise to use the crural index as a proxy for limb abbreviation in archaic populations. Copyright © 1999 John Wiley & Sons, Ltd.     

Reconstructing patterns of systemic stress in a Jomon period subadult using incremental microstructures of enamel

This study reconstructs systemic stress patterning using incremental microstructures of enamel in a subadult from the Yoshigo cemetery (3200 through 2800 BP), Aichi Prefecture, Japan, with the goal of providing an improved methodological and theoretical framework for interpreting systemic stress among Jomon people. High resolution impressions and replicas were collected for each anterior maxillary tooth. Each replica was studied under 50, 100, or 200× magnification on a measuring microscope. Perikymata spacing and enamel surface profiles were recorded using specialized software. Linear enamel hypoplasia (LEH) defects were identified as accentuated spacing in perikymata combined with a depression in the enamel surface. Each defect was placed within a chronological sequence based on decile location. Stress duration was estimated by counting the perikymata in the occlusal wall of each defect and multiplying that value by the modal periodicity for striae formation. Percentage of enamel growth disruption was estimated by dividing the number of perikymata within the occlusal wall of each matched defect by the total number of perikymata within the imbricational enamel. Eight LEH defects were chronologically matched. Chronology of LEH defects ranged between 1.2 through 3.5 years. Number of perikymata located within the occlusal wall of each defect ranged from one through 20. Estimated durations of stress ranged from 12 through 129.6 days. These durations overlapped with Neandertals, though Point Hope foragers had greater durations of stress with no overlap in interquartile ranges. Disrupted enamel growth ranged from 8.1% in the maxillary left canine to 50.7% in the maxillary right central incisor.     

Problems and pitfalls in the diagnosis of linear enamel hypoplasia in cheek teeth of cattle

Prevalence and intensity of enamel hypoplasia have been used as markers of generalized physiological stress during dental development in a wide range of mammalian taxa. We studied cattle (Bos taurus) cheek teeth exhibiting morphological characteristics that are of relevance to the diagnosis of enamel hypoplasia in this and other bovid species. These characteristics were multiple, more or less horizontally arranged (waveform) lines or grooves in the cementum of the tooth crown and the adjacent root area, leading to an imbricated appearance of the cementum. On macroscopic examination of tooth surfaces, these lines resembled linear enamel hypoplasia (LEH). Microscopic analysis of tooth sections, however, revealed that the lines occurred in the cementum only, and that the underlying enamel did not exhibit morphological irregularities. In cheek teeth of older cattle, a thick cementum layer is regularly found in the cervical crown portion and the adjacent root area. Apposition of this cementum is related to the uplifting of the teeth from their alveoli, a process that compensates for the shortening of the tooth crowns due to occlusal wear. In the studied specimens, a pronounced periodic nature of tooth uplifting and the related deposition of cementum is the likely cause for the observed imbricated appearance of the cementum. While this phenomenon may be misinterpreted as representing a case of LEH, presence of enamel hypoplasia in bovid teeth may be overlooked when the defects become filled with coronal cementum and are therefore not apparent on external inspection. This was the case in one of the cattle teeth analyzed by us, in which the hypoplastic enamel defects were, however, clearly discernible in ground sections. Microscopic analysis of tooth sections is recommended for recording of LEH in bovid teeth in cases where macroscopic examination of tooth surfaces alone does not produce unequivocal results.     

The origin of the ancient Egyptian drink Shedeh revealed using LC/MS/MS

Ancient Egyptians were buried with the most precious food and drink as sustenance for their afterlife. One of these was Shedeh, the most valued and appreciated beverage in ancient Egypt. The botanic origin of Shedeh remains unclear as no mention of its raw material has survived. Some scholars have proposed that Shedeh was a pomegranate wine, while others, a grape wine. Presented here is the first ever analytical evidence of Shedeh's origin through the analysis of a sample of a residue from an extraordinarily well preserved Shedeh amphora from King Tutankhamun's collection. The previously developed LC/MS/MS wine markers method for archaeological samples was used and our results reveal Shedeh had a red grape origin.     

An inter-site comparison of enamel hypoplasia in bison: implications for paleoecology and modeling Late Plains Archaic subsistence

Bison bison mandibular molars from the Late Plains Archaic kill/butchery sites of Buffalo Creek (Wyoming) and Kaplan-Hoover (Colorado) exhibit significant frequencies of dental enamel hypoplasia (DEH), a defect believed to reflect information about physiological status of individual animals. This study provides a methodology to estimate the ontogenetic and seasonal timing of DEH formation in bison dentition. Integration of these estimates with data from bison life history and grassland ecology allows inferences on age- and season-specific factors exacerbating periodic physiological declines that were recorded in the form of enamel hypoplasias. Differences between assemblages indicate regional variability in grassland conditions, with data from Buffalo Creek pointing to recurrent drought that reduced forage capacity and contributed to physiological stress in bison over two consecutive years. Seasons of physiological stress reflected in the DEH correspond to each of the three kill events at the locality, suggesting that predictability of bison behavior in this location was a critical factor in influencing the seasonal timing and location of repeated hunting episodes. Unlike Buffalo Creek, timings of stress episodes are not consistent with season of death in the Kaplan-Hoover bison assemblage, suggesting that favorable grassland conditions were the primary factor influencing timing of this large single-kill event in order to provision for the upcoming winter. DEH analysis represents a developing approach in the construction of models addressing key aspects of local grassland and bison ecology as well as offers unique insights into the hunting strategies and subsistence decisions of Late Plains Archaic foragers.     

Accurate sex identification of ancient human remains using DNA shotgun sequencing

Accurate identification of the biological sex of ancient remains is vital for critically testing hypotheses about social structure in prehistoric societies. However, morphological methods are imprecise for juvenile individuals and fragmentary remains, and molecular methods that rely on particular sex-specific marker loci such as the amelogenin gene suffer from allelic dropout and sensitivity to modern contamination. Analyzing shotgun sequencing data from 14 present-day humans of known biological sex and 16 ancient individuals from a time span of 100 to ∼70,000 years ago, we show that even relatively sparse shotgun sequencing (about 100,000 human sequences) can be used to reliably identify chromosomal sex simply by considering the ratio of sequences aligning to the X and Y chromosomes, and highlight two examples where the genetic assignments indicate morphological misassignment. Furthermore, we show that accurate sex identification of highly degraded remains can be performed in the presence of substantial amounts of present-day contamination by utilizing the signature of cytosine deamination, a characteristic feature of ancient DNA.     

Residential mobility and social identity in the periphery: strontium isotope analysis of archaeological tooth enamel from southeastern Arabia

Strontium isotope analysis represents an effective means of assessing mobility and reconstructing geographic residence patterns in archaeological populations. This biogeochemical technique was utilized to test the hypothesis that burgeoning interregional exchange networks and the occurrence of exotic grave goods in local tombs would correspond with a highly mobile population and a considerable immigrant presence during the Umm an-Nar (2700–2000 BC) period in the UAE. This region has been considered peripheral relative to larger civilizations in Mesopotamia and the Indus Valley, but played an important role as a major supplier of copper for the Persian Gulf. Individuals (n = 100) from six monumental Umm an-Nar tombs (Mowaihat; Tell Abraq; Umm an-Nar Island I, II, V; Unar 1) were selected to evaluate the geographic origins of tomb members. Mean ⁸⁷Sr/⁸⁶Sr ratios from local individuals interred at Mowaihat (0.708863 ± 0.000014; 1σ, n = 12), Tell Abraq (0.708873 ± 0.000020; 1σ, n = 27), Umm an-Nar Island (0.708902 ± 0.000079; 1σ, n = 33), and Unar 1 (0.708805 ± 0.000065; 1σ, n = 25) all display little isotopic variability, indicative of a population that was not highly mobile. However, coupled with archaeological evidence, three immigrants from Tell Abraq (n = 2) and Mowaihat (n = 1) identified by deviant strontium values suggest that this region was actively engaged in interregional interaction. Despite claims that these tombs acted as visible markers of territoriality legitimized by local ancestors buried within them, the presence of non-locals suggests that as commerce became increasingly important, definitions of kinship and social identity may have become more flexible to better meet the needs of the local community and those with whom they interacted.     

Late Pleistocene Crocuta crocuta spelaea (Goldfuss, 1823) clans as prezewalski horse hunters and woolly rhinoceros scavengers at the open air commuting den and contemporary Neanderthal camp site Westeregeln (central Germany)

Late Pleistocene Ice Age Crocuta crocuta spelaea ( Goldfuss, 1823) hyenas from the open-air gypsum karst site Westeregeln (Saxony-Anhalt, central Germany) is dated into the early to middle Late Pleistocene. Hyena clans apparently used the karst for food storage and as “commuting den”, where typical high amounts (15% of the NISP) of hyena remains appear, also faecal pellets in concentrations for den marking purposes. Additionally small carnivores Meles, Vulpes and Mustela appear to have used some cavities as dens. Several hundreds of lowland “mammoth steppe fauna” bones (NISP = 572) must have been accumulated primarily by hyenas, and not by Neanderthals at the contemporary hyena/human camp site. Abundant caballoid horse remains of “E. germanicus Nehring, (1884)” are revised by the holotype and original material to the small E. c. przewalskii horse. Woolly rhinoceros Coelodonta antiquitatis remains are also abundant, and were left in several cases with typical hyena scavenging damages. Rangifer tarandus (11%) is mainly represented by numerous fragments of shed female antlers that were apparently gathered by humans, and antler bases from male animals that were collected and chewed in few cases (only large male antlers) by hyenas. The large quantities of small reindeer antlers must have been the result of collection by humans; their stratigraphic context is unclear but such large quantities most probably resulted from schamanic activities. The hyena site overlaps with a Middle Palaeolithic Neanderthal camp, as well as possibly with a later human Magdalénian site.     

Reconstructing faunal migrations using intra-tooth sampling and strontium and oxygen isotope analyses: a case study of modern caribou (Rangifer tarandus granti)

Isotopic analyses of incrementally developed dental tissues can be used to reveal patterns of movement and diet in animals. However, the suitability of these methods for the reconstruction of herd movements has not yet been demonstrated. Inter-individual behavioural and isotopic variability at the herd scale, and the implications for archaeological and palaeocological applications, can only be demonstrated through the testing of modern animals. In this pilot study, dual-element isotopic profiles were created from incrementally developed dental tissues of five individuals selected from a modern herd of migratory Alaskan caribou (Rangifer tarandus granti). Enamel from second and third molars from the individuals was sequentially sampled in order to reconstruct time-series isotopic profiles. Variation in the strontium (⁸⁷Sr/⁸⁶Sr) and oxygen (δ¹⁸O_CARB) isotope ratios of sequentially sampled enamel were compared to documented herd movement patterns and local geological and environmental conditions. Four individuals displayed the same general trends, although absolute isotopic values varied. One individual displays a very different trend and may represent a behavioural outlier or an immigrant from a semi-domesticated reindeer herd. The implications of this study to herd movement reconstruction in the past are discussed.     

Analysis of ancient mycolic acids by using MALDI TOF MS: response to “Essentials in the use of mycolic acid biomarkers for tuberculosis detection” by Minnikin et al., 2010

The mycobacterial cell wall is consists of several long chain lipid and glycolipid components. Mycolic acids are major and unique fraction of the cell envelope of mycobacteria that include the ancient causative agents of tuberculosis and leprosy. The analytical investigation of these lipid biomarker residues is one of the most promising perspectives in the field of molecular paleopathology. Recently published in this journal, Minnikin et al. present a systematic critique of the MALDI TOF MS analysis for determination of ancient mycolic acids, focusing on our previous paper. In this study, our mass spectrometric investigations by commonly used 2,5 DHB matrix were presented with our comments to the critique authors. On the base of our previous and recent mass spectrometric results we have to realize that the clinical protocols and standards cannot directly be used for the biomolecular paleopathological investigations. The applicability of the recent mycobacterial and clinical results is very limited in the biomolecular archaeology, thus the recent scientific results and protocols should be adapted carefully to bioarchaeological sciences.     

Reappraisal of ‘chronospecies’ and the use of Arvicola (Rodentia,Mammalia) for biochronology

The water vole, genus Arvicola, is characterised by a broad geographic distribution throughout Europe and is widespread during the late Middle and Upper Pleistocene. This genus is used as a major biostratigraphic tool within the Quaternary. Specific determinations using the Schmelzband-Differenzierung-Quotient or SDQ have identified many chronospecies within the fossil species Arvicola cantiana (Hinton, 1910). As SDQ calculation remains limited, this study reappraises the Arvicola genus in terms of morphodiversity and morphospace using outline analysis which takes into account the tooth as a whole. Outline analysis suggests that one single species of Arvicola, A. cantiana, was present during the Pleistocene. This species shows great variability with no trends or patterns in morphospace. Thus, these results call into question the reliability of SDQ for specific determinations and throw doubt on the biochronological framework based on Arvicola.     

Seasonality and intra-site variation of Neanderthal occupations in the Middle Palaeolithic locality of Payre (Ardèche,France) using dental wear analyses

The reconstruction of Palaeolithic subsistence and settlement systems at the Middle Palaeolithic site of Payre (France) is undertaken through the application of dental wear analyses combined to zooarchaeological, technological, and ecological indicators. Three archaeological levels were investigated. Level D, dated to MIS 5, could correspond to an occupation during the cold season. In levels G and F, dated to MIS 8-7, animals were probably hunted during a warmer season. According to dental wear analyses, it is likely that level F has actually recorded a succession of short occupations, contrary to what is observed in the levels G and D. Those differences in the duration of site occupation are discussed in the light of previous sedimentological, zooarchaeological, and technological studies.     

Evidence for long-term averaging of strontium in bovine enamel using TIMS and LA-MC-ICP-MS strontium isotope intra-molar profiles

Abstract

High spatial resolution micro-sampling of tooth enamel offers the possibility of high temporal resolution isotope data to reconstruct climate, environment, diet and mobility. Questions remain about the duration and pattern of the maturation phase of enamel and the existence and direction of chronological 'time-lines'. LA-MC-ICP-MS measurements of c. 400 μm craters and TIMS analyses of transverse enamel sections of an archaeological bovine third molar were undertaken to investigate the long-term averaging of incorporated strontium. The same gradually increasing isotope profile was obtained from both approaches, indicating that the large increase in spatial resolution did not change the response profile obtained. The results suggest that even at the microscopic scale, strontium is incorporated over a period in excess of 12 months. Averaging of the input signal may result from both long-term retention of strontium in the skeleton and recirculation in the body pool, or long-term maturation of enamel on a microscopic scale. Whichever mechanism is responsible, it may not be possible to recover strontium isotope ratios with a high time resolution from cattle molar enamel unless there is a large imbalance in the amount of strontium supplied by different sources. Consequently, strontium isotope profiles may not be synchronous with those of lighter isotope systems.     

Detection of blood proteins in ancient human bone using ELISA: A comparative study of the survival of IgG and albumin

ABSTRACT The immunological identification of species-specific blood proteins in skeletal remains has an important role in the reconstruction of ancient dietary, ritual and domestic behaviour. However, which protein provides the most suitable target for such work has not been considered previously, and the present investigation was carried out on human bone to assess the relative merits of IgG and albumin. Extracts of bone from 31 individuals (from the English Civil War, medieval, Early Saxon, Roman, Iron Age and Bronze Age periods) were tested by an enzyme-linked immunosorbent assay (ELISA) using monoclonal antibodies. Albumin was detected in 23 of the 31 skeletons, including those from the Iron and Bronze Ages, whereas IgG was identified in only one; this difference was very highly significant (P < 0.0005, χ² 30.0). The better detection rate for albumin was thought to be due to its higher original blood level, inherent differences in survival pattern being considered unlikely. Testing the same extract for both proteins in the same assay system ensured that any effects due to soil factors, burial conditions, physical integrity of the bone, chronological age, amount of original specimen, method of analysis and type of reagent were the same for each part of the study, thus permitting a valid comparison of antigen survival to be made. Control samples, including fresh and ancient animal bone extracts and human and animal sera, confirmed that the results were consistent and specific, with no cross-reactivity between human and animal material, and that as little as 10 ng of protein was detectable. In summary, the investigation compared the suitability of IgG and albumin for osteoarchaeological studies using a highly specific, sensitive and versatile ELISA; the results showed that albumin was a far better target molecule for such work and that it can survive in ancient bone for long periods of time.     

Amplification and sequencing of Trichuris trichiura ancient DNA extracted from archaeological sediments

Despite high prevalence of Trichuris trichiura infection, PCR-based analysis on T. trichiura from archaeological samples has not been established so far. In the present study, we sought to perform PCR-based amplification of T. trichiura aDNA using the sediments from medieval tomb of Korea. The presence of Trichuris eggs were first detected by microscopic observation; then confirmed by PCR-based aDNA analysis. Obtained sequence showed 100% homology to that of the small subunit ribosomal RNA (SSUrRNA) gene of T. trichiura but distinct from that of other Trichuris species. PCR-based aDNA analysis in this study can serve as effective method to confirm the presence of T. trichiura eggs in the soils or coprolites collected from archaeological sites.     

Analysis of enamel ultrastructure in archaeology: The identification of Ovis aries and Capra hircus dental remains

Ultrastructural features of deep, intermediate and superficial enamel were quantitatively assessed for the mandibular first permanent molars of 10 specimens each of the domestic sheep (Ovis aries) and goat (Capra hircus). The means of a number of variables differed interspecifically at high levels of statistical significance, especially with regard to the enamel of intermediate depth. A canonical discriminant function analysis employing nine variables at all three enamel depths resulted in the correct taxonomic assignment of 95% of the specimens comprising the present sample. These results, coupled with the simple preparative and analytical methods presented here, may enable archaeozoologists to utilize enamel ultrastructure in order to discriminate between fragmentary dental remains of these caprine species.     

In situ oxygen isotope micro-analysis of faunal material and human teeth using a SHRIMP II: a new tool for palaeo-ecology and archaeology

A Sensitive High Resolution Ion MicroProbe (SHRIMP II) has been used to make high spatial resolution in situ micro-analyses of oxygen isotopes in fish otoliths, and teeth from fossil herbivores and a Neanderthal. Large intra-tooth variations in the oxygen isotopic composition (up to 9‰) were observed in the enamel of herbivores from the Neanderthal fossil site of Payre, consistent with preservation of seasonal cyclicity. The range of isotopic compositions observed in Neanderthal tooth enamel was much smaller (∼3‰), possibly the result of a longer enamel maturation time averaging out variability. An archaeological otolith from a Preceramic site in Northern Peru exhibited marked changes in δ¹⁸O over life, due either to the fish occasionally migrating from the sea to a lower salinity habitat, or to short-lived rises in sea water temperature. A fish otolith from Australia's Willandra Lakes World Heritage Area showed clear seasonal variations, but also a general trend towards isotopically heavier and more saline water, as indicated by higher δ¹⁸O and Sr/Ca values resulting from increased evaporation. The results of these case studies are compared to results of oxygen isotope analysis using more conventional methods and demonstrate the ability of the SHRIMP II to provide precise high spatial resolution in-situ oxygen isotope analyses of a variety of biogenic materials. This approach has major advantages over conventional methods. It can provide rapid, micro-scale isotopic analyses of sub-permil precision without the need for chemical preparation of the sample.     

An investigation of diet in early Anglo-Saxon England using carbon and nitrogen stable isotope analysis of human bone collagen

The principal aim of this work is to investigate whether protein sources in human diets in early Anglo-Saxon (5th-7th century AD) England varied with geographic location, or with respect to age or sex. The methodology used was analysis of δ¹⁵N and δ¹³C in human bone collagen from 76 adult skeletons from a total of 18 different cemeteries located in inland, riverine and coastal environments. In order to control for the possible effects of socio-economic status on diet, only high status individuals, as identified by grave goods, were studied. Data were analysed using statistical manipulation of the raw results and using IsoSource (Phillips and Gregg, 2003), a mathematical treatment which models the composition of the protein part of human diets using bone stable isotope ratios when the isotopic values for potential protein sources are known or can reasonably be inferred. The results suggest that protein sources varied little according to geographic location and that terrestrial foods dominated at all locations. However there were some subtle patterns. Slightly elevated δ¹³C in skeletons from coastal locations, and δ¹⁵N in those from riverine sites may indicate that communities in these locations made greater use of marine and freshwater resources respectively. If this is correct then it demonstrates that 5th-7th century communities made some use of wild resources even within a predominantly agrarian economy. In general the analysis of the raw data and the IsoSource results were mutually supportive, and this work demonstrates the value of this twin-pronged approach to analysis of human bone stable isotope data.     

Distinguishing prehistoric cereal grains of Triticum and Secale on the basis of their surface patterns using the scanning electron microscope

As an additional precaution in identifying prehistoric cereal grains of wheats and rye, anatomical investigations have been undertaken on the microscope patterns of the grain surfaces. This technique has been tested on some grains of the wild and cultivated state from four sites in the Near East, dated to between 9000 and 5500 BC.