Recovery of DNA from archaeological insect remains: first results,problems and potential

We report the recovery of short fragments of PCR amplifiable ancient DNA from exoskeletal fragments of the grain weevil Sitophilus granarius (L.) extracted from Roman and medieval deposits in Northern England. If DNA preservation in archaeological insect remains is widespread then many applications in the spheres of evolutionary studies and archaeology can be conceived, some of which are outlined.     

Geoarchaeological insights from a Roman age incineration feature (ustrinum) at Enconsta de Sant'Ana (Lisbon,Portugal)

Ustrina are incineration funerary structures that are relatively common in Roman age cemeteries. Salvage excavations at Encosta de Sant'Ana (Lisbon, Portugal) in 2002 brought to light a part of the necropolis of the Roman town of Olisipo, including some ustrina. One of them, designated Burial 1 during fieldwork, is analyzed here from a geoarchaeological viewpoint to understand the formation processes of such an archaeological feature, namely its construction technique, use and function. The study of site context and subsurface pedofeatures, and the application of archaeological soil micromorphology, revealed that the ustrinum was constructed digging a hollow in bedrock and building a mud-brick ridge around it, with raw material taken from the local bedrock. The structure was used at various times and remodelled at least once, and its base was not always thoroughly cleaned – according to the custom called “pars pro toto” by Roman authors – and probably left open when not in use.     

Stable isotope analysis of 14 individuals from the Mesolithic cemetery of Vasilyevka II,Dnieper Rapids region,Ukraine

Bone collagen extracted from 14 humans from the Mesolithic cemetery of Vasilyevka II was analysed for their δ¹³C and δ¹⁵N ratios. This cemetery is one of only two later Mesolithic cemeteries from the Dnieper Rapids region, being dated to 7300–6220 cal BC on the basis of three radiocarbon determinations. This analysis provides insights into the nature of the diet of the Dnieper populations at the very end of the Mesolithic period, prior to the adoption of pottery in the region, and the assumed shift towards the exploitation of domesticates in the economies of the populations of the Dnieper region, and considers these in relation to broader temporal indicators of diet in the region.     

Roman agriculture in the conventus Bracaraugustanus (NW Iberia)

A review of archaeobotanical data, together with new, still unpublished data, from Roman sites in conventus Bracaraugustanus suggests the Romanization of the northwest Iberia brought little changes to the agricultural strategies of local communities in indigenous-type settlements. The main crops remain the same as in the Iron Age: Triticum aestivum/durum, Panicum miliaceum, Hordeum vulgare subsp. vulgare, Triticum turgidum subsp. dicoccum and T. aestivum subsp. spelta, Avena and Vicia faba. The first secure reference for the cultivation of Secale cereale in the region comes from a Roman context, suggesting that it was introduced in this period, although it probably remained a minor crop.     

Introduced taro (Colocasia esculenta) and yams (Dioscorea spp.) in Podtanean (2700–1800 years BP) deposits from Mé Auré Cave (WMD007), Moindou,New Caledonia

Plant microfossil analysis was carried out on deposits bearing Podtanean (2700–1800 years BP) ceramics from Mé Auré Cave, Moindou, New Caledonia. Starch residues of introduced Colocasia esculenta, Dioscorea esculenta and one or more, undifferentiated Dioscorea species were identified. The latter include Dioscorea alata, D. bulbifera, D. nummularia and D. pentaphylla. The data provide the first direct evidence of prehistoric horticulture in New Caledonia.     

Clarifying prehistoric parasitism from a complementary morphological and molecular approach

This paper reports an approach to the identification of prehistoric parasitic infection, which integrates traditional morphological methods with molecular methods. The approach includes the strengths of each method while mitigating the limitations. Demonstrating the efficacy of this approach, we provide a case study from a 1400 year old desiccated fecal sample from La Cueva de los Muertos Chiquitos, archaeological site, near Rio Zape, Durango, Mexico. Traditionally prepared microscope slides were processed via microscopy and tentative ascarids were identified. Information regarding the parasites' developmental stage was recorded. DNA was then extracted directly from the slide material. From this DNA extract, a small segment of the 18S ribosomal RNA gene variant that is specific to Ascaris, and its phylogenetically close relatives, was targeted for PCR amplification and sequencing. Phylogenetic analysis of the DNA sequence best matched a member of physalopterids, rather than ascarids, with a single exception of a match to Contracaecum spiculigerum. Subsequent extractions, amplifications and sequencing of the original rehydrated coprolite material confirmed these results. The C. spiculigerum sequence represented a phylogenetic anomaly and subsequent analysis determined the sequence was an error in the BLAST database, likely attributable to misidentification of juvenile specimens prior to sequencing and submission. Physaloptera are a difficult genus to identify morphologically and can carry major health burdens. They may be underreported in humans, in part, because of morphological similarities to the more common human parasites belonging to ascarids. We conclude that integrating traditional morphological methods with molecular methods can help resolve this issue, in both contemporary and prehistoric populations.     

The coloured glass of Iulia Felix

Research on the cargo of glass in the Roman ship Iulia Felix, wrecked off the town of Grado (province of Udine, North Italy) in the first half of the 3rd century AD and composed of recycling cullet carefully selected for colour and type, provided much information on Roman glass production technology. A combined approach, involving analytical, statistical, and archaeological evidence, included chemical analyses (X-ray fluorescence, electron microprobe), which indicated that the coloured samples were all soda-lime-silica in composition, with natron as flux, although cluster analysis identified many compositional groups. Comparisons among the compositional groups of the colourless glass, previously studied, and those of coloured glass showed that the production technologies of the colourless glass vessels constitute two well-defined technological end-members, also related to group types, into which those of the coloured glass samples fall. In particular, coloured glass samples—all bottles, low-status vessels—were produced with mainly beach siliceous-feldspar-calcareous sand. However, unlike the colourless type, strict control of raw materials and decolourising processes was not adopted, and recycling was also practised, as demonstrated by the Sb₂O₃, Cu and Pb patterns. In this context, a “recycling index” (RI)—[(Sb₂O₃)_X/(Sb₂O₃)_Ref] * 100—is proposed here for the first time, in order to quantify the extent of recycling of antimony colourless glass in the batch. RI is valid for glass containing abundant Sb from an end-member of colourless glass. In conclusion, although it cannot be stated unequivocally that the identified compositional trends are related to different production centres or different raw materials, the strong evidence of compositional variability among all the Iulia Felix glass samples, both colourless and coloured, supports the dispersed production model for Roman glassware and the common practice of recycling in Roman imperial times, especially for low-status vessels.     

Stable isotope palaeodietary study of humans and fauna from the multi-period (Iron Age,Viking and Late Medieval) site of Newark Bay,Orkney

We report here on stable carbon and nitrogen isotope measurements of human and faunal bone collagen from the Iron Age, Viking Age, and Late Medieval site of Newark Bay, Orkney, Scotland. We found a wide range of results for humans in both δ¹³C (−15.4‰ to −20.3‰) and δ¹⁵N (8.6‰–15.6‰) values. The enriched carbon and nitrogen values indicate the consumption of significant amounts of marine protein, which is very unusual for post-Mesolithic (e.g. 4000 cal BC) UK and European populations. Also of interest is a statistically significant difference in δ¹³C (t = −2.48, p = 0.011) and δ¹⁵N (t = −2.44, p = 0.011) values, and therefore diets, between adult males and females at this site, with males (δ¹³C = −17.8 ± 1.2‰, δ¹⁵N = 13.2 ± 1.6‰) having, on average, a higher proportion of marine protein than females (δ¹³C = −18.9 ± 1.1‰, δ¹⁵N = 11.8 ± 1.8‰). The weaning age of the sub-adults was difficult to interpret due to the large isotopic variation in the adult females, but nearly all individuals between birth and 1.25 years have elevated δ¹⁵N values indicating that they were breastfed to some extent.     

Macrobotanical food remains from a trans-Holocene sequence at Daisy Cave (CA-SMI-261), San Miguel Island, California

Carbonized macrobotanical remains from a trans-Holocene archaeological and paleontological sequence at Daisy Cave provide important insights into the use of food plants by Paleocoastal people as well as later groups on California’s Northern Channel Islands. Small seeds are rare among the macrobotanical remains recovered in the cultural strata at Daisy Cave, which are dominated by charcoal from woody plants used as fuel. The recovery of Brodiaea-type corms from the Early and Late Holocene strata suggests, however, that geophytes were an important source of carbohydrates and calories for Channel Islanders throughout the Holocene. The proposed importance of geophytes is consistent with the abundance of Brodiaea in island vegetation communities recovering from more than a century of overgrazing, as well as the large numbers of digging stick weights found in island sites.     

Chemical characterisation of anthro-technosols from Bronze to Middle Age in Bologna (Italy)

The aim of this research was the understanding of a peculiarly expanded soil sequence in Bologna (i.e., Roman Bononia, Etruscan Felsina), one of the most important archaeological poles for Etruscan colonisation and settlement in northern Italy. The uppermost part of the chronological sequence dating from the Bronze Age up to medieval and modern times was analysed for the first time from geochemical and pedological viewpoints. The integration of archaeological, stratigraphical and pedological data supported by soil chemical analysis, a fundamental key for reconstructing a correct evolutionary sequence, made it possible to recognise seventeen buried Soil Units (ancient Technosols, Anthrosols and Cambisols) characterised by different kinds and degrees of intensity of anthropogenic influence. In some cases, the results show a relatively severe element concentration (Cu, Sn) mainly characterising the Iron Age (Etruscan and Villanovan) stratigraphic units, representing an ancient industrial pollution linked to local dispersal of melting activity dump products generated in near-site surrounding areas. Therefore, a comparison was possible between natural blank and anthropogenically polluted geochemical values for some local soils.     

Pollen-wood analysis at the Neapolis harbour site (1st–3rd century AD,southern Italy) and its archaeobotanical implications

Three Roman shipwrecks (Napoli A and Napoli C – 1st cent. AD; Napoli B – 2nd century AD) were recovered in the sandy-silt sediments representing the infilling of a protected inlet of Neapolis harbour (Naples, southern Italy). Extensive wood analysis suggests that a very attentive selection of species was made in shipbuilding, the choice of timber being related to wood technological properties and to the structural uses of the construction elements. Pollen data obtained from the coeval sedimentary layers revealed that all the timber taxa (apart from Picea/Larix) were present in the surroundings of the study area. The identified forest taxa are very common in the Mediterranean basin and thus the pollen-wood comparison was not able to define the location of the shipyards. Broad comparison with western Mediterranean wrecks evidenced the peculiarity of the Neapolis ships where the systematic use of both Juglans regia and Cupressus sempervirens was highlighted. Archaeological, biogeographical and archaeobotanical considerations suggest the local provenance of the ship C and constrain the possible origin area of both the ship Napoli A and Napoli B to central-southern Tyrrhenian coasts.     

Ancient DNA analysis on Clonorchis sinensis eggs remained in samples from medieval Korean mummy

In the present study, Clonorchis sinensis (C. sinensis) ancient DNA (aDNA) was successfully extracted from human remains discovered in a tomb dating to the medieval Joseon dynasty of Korea. The presence of C. sinensis eggs was confirmed by microscopic observation, after which a PCR-based aDNA analysis was performed using primer sets designed for the amplification of nuclear ribosomal internal transcribed spacer 1 (ITS1), 2 (ITS2) and mitochondrial cytochrome c oxidase 1 (CO1) genes. The sequences obtained were 100% homologous to some contemporary C. sinensis gene sequences reported from Korea and other East Asian countries. We believe that the results of our analysis expand the temporal and geographical scopes of research on the history of C. sinensis infection in different human populations.     

Human subsistence strategy at Liuzhuang site,Henan, China during the proto-Shang culture (∼2000–1600 BC) by stable isotopic analysis

Since the discovery of the proto-Shang culture, created mostly by ancestors of the Shang clan from the late Neolithic Age to the early Shang period (∼2000–1600 BC), the subsistence strategy and lifestyle of humans in China during their movement southwards have been a great focus. Chinese literature and archaeological findings suggest that the proto-Shang societies were composed of different cultural groups and had various subsistence strategies. For example, at the Liuzhuang site, three types of burials, i.e., stone coffin, wooden coffin and earthen shaft-pit, are found. The wooden coffin and earthen shaft-pit burials had been adopted locally in the Central Plains since the Neolithic Age while the stone coffin burials were usually used by people living in Northeast China and had never been found in the Central Plains before. In this study, stable carbon and nitrogen isotopic analyses were performed on human bones from the Liuzhuang site and animal bones from Zhangdeng site in Henan province, China to determine whether different social groups had various accesses to food resources and whether their dietary difference was related to inequality in social status. Humans have mean δ¹³C and δ¹⁵N values of −7.6 ± 0.6‰ and 9.6 ± 1.0‰ (n = 19) respectively, which strongly indicates that humans rely primarily on C₄-based food. The main contribution of C₄-based food in their diet is from millet agriculture or animals that consume millet by-products. The isotopic spacing of carbon and nitrogen isotopic values between pigs and humans, between dogs and humans, and between cattle and humans, all imply that these animals were the main meat resources for humans. Surprisingly, the δ¹³C values and δ¹⁵N values of humans with different types of burials are quite close, indicating that they had equal access to food resources. This result suggests that the proto-Shang humans had adapted to the local subsistence strategy, and the local cultural factors in the Central Plains were very well integrated into proto-Shang culture.     

Ectopic paragonimiasis from 400-year-old female mummy of Korea

Of the parasite eggs discovered in ancient samples from Korean archaeological sites, Paragonimus spp. are of particular importance in that they are regarded as one of the most insidious trematode infection sources. Although their infection prevalence decreased rapidly in the early 20th century, archaeoparasitological studies on the species are still required, as historical knowledge of paragonimiasis remains far from comprehensive. Fortunately, we recently were given a chance to examine a medieval Korean mummy in a good state of preservation. Using morphological techniques, we discovered evidence of ectopic paragonimiasis in the sample from the 17th-century female. When the ITS 2 gene was extracted, amplified and sequenced from Paragonimus eggs, it showed 100% homology to the sequences of modern Paragonimus westermani reported from Korea and Japan, forming a cluster distinct from South Asian P. westermani. Our report is the first-ever analysis of ancient Paragonimus DNA from any archaeological field in the world. The ectopic paragonimiasis diagnosis made in this study, especially involving the liver sample, also is the first of its kind in archaeoparasitology.     

The colourless glass of Iulia Felix

The present paper focuses on 85 colourless glass samples selected among the recycling cullet found in the Roman ship Iulia Felix, wrecked off the town of Grado (province of Udine, North Italy) in the first half of the 3rd century AD, with the aim of examining their chemical composition, investigating similarities within and between the three established group types (cups, plates, bottles), and comparing the chemical compositions of the Iulia Felix glass samples with groups reported in the literature for colourless glasses. Chemical analyses, performed by X-ray fluorescence and electron microprobe, indicate that the samples were all soda-lime–silica in composition, with natron as flux, according to typical Roman production technologies. Chemical data are treated by multivariate statistical tools, such as cluster analysis and the NPC test. Statistical analyses allow us to conclude that the Iulia Felix colourless glasses were produced by at least two different production technologies related to group type, confirming the trend recently identified in the literature. In addition, the trace element patterns (particularly those of Sr, Zr and Ba) suggest that beach sand with differing amounts of alkali feldspars was predominantly used as raw material, like those specifically mentioned by Pliny for glass production.     

Lost writing uncovered by laser two-photon fluorescence provides a terminus post quem for Roman colonization of Hispania Citerior

In this work, two-photon absorption fluorescence is used as a non-destructive method to detect the presence of paint upon an archaeological sample. The objective was to recover writing that, due to the discoloration caused by the passage of the time, was barely readable. The technique has been successfully applied to determine the consular date painted upon the neck of a Dressel 1A amphora found in the Roman village of Iesso (Guissona), in Catalonia. The identification of the consular date provides a terminus post quem for the foundation date for the city as well as a starting date for the Roman colonization of Hispania Citerior.     

Geographic variation in bone carbonate and water δO values in Mendoza,Argentina and their relationship to prehistoric economy and settlement

Questions of mobility, settlement pattern, and their relation to economic organization and resource use are central to ongoing work in central-western Argentina. Here we analyze geographic patterns in the distribution of 178 human bone carbonate δ¹⁸O samples, 46 human tooth enamel carbonate δ¹⁸O samples, and 48 water δ¹⁸O samples from throughout the Andean Cordillera and Monte Desert and evaluate their implications for prehistoric mobility and economy. We confirm and refine previous generalizations regarding a highland/lowland dichotomy in water δ¹⁸O values and show that the range of human carbonate δ¹⁸O values generally reflect available water sources. While there is little within-lifetime change in patterns of water use, we show that most individuals have stable isotope signatures consistent with water use from multiple areas or areas other than where they were ultimately interred. These data indicate high levels of residential mobility, and we conclude by discussing their implications for our understanding of regional prehistory.     

Common ware production at Thamusida: dating and characterisation of Roman and Islamic pottery

Twenty-one samples of likely Roman, likely Islamic and unknown common ware from the archaeological site of Thamusida (Rabat, Morocco) were analysed in order to anchor selected types of pottery to a limited time span and, possibly, to a production area and technology. Analytical techniques were thermoluminescence, optical microscopy, scanning electron microscopy and X-ray fluorescence. The results arising from this research are definitely useful for the study of the site of Thamusida as well as for all researchers involved in archaeological and archaeometrical research in Morocco. Chronologies proposed on a typological base have been denied twice: a likely Islamic cup dates back to the second century a.d.; vice versa, a stewpot, framed into the Roman period, resulted to be an eighth century a.d. production. Moreover, the identification of an eighteenth century ceramic production is of outstanding importance, as it characterises a completely unknown production. Regarding the production area, four samples of both Roman and Islamic periods have been recognised as local productions of Thamusida.     

Tikal timbers and temples: ancient Maya agroforestry and the end of time

Tikal, a major lowland Maya civic-ceremonial center in the heart of the Petén region of Central America, relied heavily on the adjacent lowland rainforest as a resource base for fuel and construction materials. In this study, we analyzed 135 wood samples from timbers used in the construction of all six of the city's major temples as well as two major palaces to determine which tree species were being exploited and to better understand ancient Maya agroforestry practices during the Late Classic period. We found evidence for a change in preference from the large-growing, upland forest species, Manilkara zapota, to a seasonal wetland species Haematoxylon campechianum in A.D. 741 as well as a decrease in lintel beam widths over time. Though M. zapota later returned as the wood species of choice in A.D. 810, beam widths were found to be significantly smaller. These findings concur with models that hypothesize widespread deforestation during the Late Classic period and indicate a declining forest resource base by the 9th century A.D. Because of the many large timbers available for temple construction in the 8th century, some system of forest conservation is indicated for the ancient Maya prior to the Late Classic period.     

‘Uproot and destroy,build and plant’: legatine authority under Pope Gregory VII

Confronted with the need for scholarly criteria in properly defining the ad hoc papal institution existent under Pope Gregory VII (1073–85), this paper seeks to clarify the title, office, and jurisdiction of the eleventh-century reforming legate. Discussing the Roman origins of this office through to the twelfth century – taking into account the political, ecclesiastical and legal constraints of the period – questions are raised concerning the extent and nature of legatine authority (especially as the reformers understood it). Contemporary criteria are unclear, but modern scholars can infer some regularities from Gregory VII's Register and other contemporary sources as to how this office operated in the last quarter of the eleventh century, and ultimately, to understand more clearly how reform was being implemented in the provinces.