Genetic sexing to determine the optimal discriminant functions for the analysis of archaeological remains from El Hierro (Canary Islands)

A correct sex assignment of a given bone or bone fragment is of paramount importance for the archaeologist, anthropologist and in forensic medicine. Discriminant functions, combining several anthropometric measurements obtained from individuals with known sex are useful tools for this purpose, but it is essential to know exactly the sex from which the measures are obtained. This is an easy task in modern populations, but it is problematic in ancient ones, since even when the entire skeleton is available, diagnosis of sex is not 100% accurate. Sexing by genetic methods by amplifying the first intron of the amelogenin gene constitutes a much more accurate method for sexing bones and may be the gold standard for further elaboration of discriminant functions which may serve for sexing new bones dug up in future excavations. With this aim we have genetically sexed 52 (out of 59) tibiae belonging to the prehispanic population of El Hierro, in the Canary Islands, identifying 18 women and 34 men, and then, performed discriminant functions combining several anthropometric variables. These functions show a high accuracy in sex diagnosis (94.2%; area under ROC curve = 0.954 with the best of the functions), so that they allow correct sexing of tibiae or tibiae fragments (only proximal third, distal third or midshaft). Thus, genetic sexing obviates the problem of finding an accurate gold standard for the elaboration of discriminant functions for ancient bones. This method could be applied to other populations of different antiquity and different ethnicity.     

Osteometric and molecular sexing of cattle metapodia

Sex identification of skeletal remains based on morphology is a common practice in Zooarchaeology. Knowledge of the sex distribution of slaughtered or hunted animals may help in the interpretation of e.g. hunting or breeding strategies. Here we investigate and evaluate several osteometric criteria used to assess sex of cattle (Bos taurus) metapodia using molecular sex identification as a control of the metric data. The bone assemblage used to assess these new criteria derives from the Eketorp ringfort in the southern parts of Öland Island in Sweden. One hundred metapodia were selected for molecular analysis of sex and we were able to genetically identify the sex of 76 of these elements. The combined results of the molecular and osteometric analyses confirm a significant size difference between females and males for several measurements for both metacarpals (Mc) and metatarsals (Mt). Our results show that some measurements are applicable for metapodials. These measurements include the slenderness indices such as the Mennerich’s index 1 and 3, as well as the distal breadth (Bd), the breadth between the articular crests (Bcr), and the maximum breadth of the lateral trochlea (BFdl). We show that they can be used for sexing of both metacarpals and metatarsals. The latter measurements offer an opportunity to study fragmented elements and thus a higher number of elements may be utilized for morphological sexing of archaeological bones. Size comparisons of Mc and Mt may also aid in the separation of bulls and oxen.     

Reindeer Hunting in the Upper Palaeolithic: Sex Ratios as a Reflection of Different Procurement Strategies

This paper is a first attempt to investigate the variability in reindeer-procurement strategies in Upper Palaeolithic sites by means of sex ratios, as reflected by osteometrical data. For this purpose the “Variability Size Index” method is employed. The idea behind the analysis is that sex ratios in reindeer (but also in red deer and in bovids) were mainly determined—as they are in modern populations—by the reproductive biology of the animals and not by environmental conditions. Thus, any deviations from these ratios must be explained in terms of behavioural/cultural variables. The faunal material for the study comes from sites in southwest France, Switzerland and southern Germany. During the Upper Palaeolithic females dominate in all assemblages, but a clear variability can be seen: some sites show sex ratios similar to those found in Palaeolithic carnivore dens, whereas other sites show somewhat higher frequencies of bulls. The variation in the sex ratios of reindeer among Upper Palaeolithic sites cannot be explained by either their chronological position or topographical location, but it is more probably a result from seasonal differences in reindeer-procurement. Thus generalizations about the exploitation of reindeer or other prey species based on results of a single site or layer of a site will mask the variability in the subsistence strategies which existed either during the Upper Palaeolithic or, at a finer scale, even during the Magdalenian.     

Disentangling long bones of foxes (Vulpes vulpes and Alopex lagopus) from arctic archaeological sites

To discern the presence of two anatomically close species within an archaeological assemblage is always a problem for the analyst. A particularly interesting case is the distinction between the red fox (Vulpes vulpes) and the arctic fox (Alopex lagopus), which is often determined using non-rigorous criteria and producing results that must be regarded with caution. Classical methods for separating these two species and determining sexual dimorphism, and eventually the sex ratio, such as analyses using uni- and bivariate plots, are based on arbitrarily fixed limits between sexes. In this text, a more robust statistical method termed mixture analysis (MA) is used to determine the species of limb bones from foxes. First, the MA is applied to a sample of each species using metric data taken from a collection of present-day fox skeletons. Afterwards, the MA is applied to archaeological samples dated to the Dorset period and retrieved from the Tayara site (near Salluit, South Hudson Strait, Nunavik). The results clearly demonstrate that the greatest length (GL) of long bones, especially the humerus and tibia, is the best measurement for distinguishing the species, followed by the distal breadth and the proximal breadth; and that GL is better suited for sexing foxes. The results of MA applied to the Tayara site collection lead to the conclusion that the red fox is present along with the arctic fox among the assemblage, and that there is no fox body size change during the last two millennia in the Eastern Arctic.     

Implications of age variation and sexual dimorphism in modern equids for Middle Pleistocene equid taxonomy

Interspecific variation in the equid lineage is limited when compared with other large mammal lineages, while a considerable amount of intraspecific ecomorphological variation occurs. This has led to considerable debate regarding the taxonomic status of palaeontological and archaeological equid remains. The possible confounding impact of sex and age variation on analyses of archaeological equid remains has so far remained untested. This could be especially problematic when it is unknown whether an assemblage contains more than one equid species, breed or hybrid. Here, sex and age variation in modern equid species is examined and compared to variation in Pleistocene equid assemblages from northwest Europe. Sex variation in the longbones of modern equid species was found to be lower than variation over time. Similarly, age variation in dental elements of the same species is predominantly lower than diachronic variation, although caution needs to be taken when an archaeological assemblages consists mostly of elements at a similar wear stage. To assess whether late Middle Pleistocene caballoid horse fossils should be assigned to multiple species or be considered to form a monospecific group, the coefficients of variation for measurements on fossil horse remains were compared with those for modern equid specimens. Results indicate that the fossil assemblages are similarly variable to samples of modern material. Taken as a whole, the late Middle Pleistocene caballoid horse lineage is equally variable to an assemblage of modern ponies of a variety of different breeds. This implies that the variation observed between samples dating from different parts of the Middle Pleistocene can be characterised as intraspecific variation within a single species reflecting ecomorphological adaptations to the changeable Pleistocene climate. Copyright © 2010 John Wiley & Sons, Ltd.     

An exploration of character traits and linear measurements for sexing mountain gazelle (Gazella gazella) skeletons

The skeletal elements of mountain gazelle (Gazella gazella) have proven difficult to sex with statistical confidence due to wide overlap in the body size of the two sexes. We studied a sample of 53 modern mountain gazelle skeletons to determine which character traits and metric measurements best predict sex. The success of the character traits was determined using blind tests while the metrics were examined using discriminant function analysis. The most useful elements include the previously identified horn core, pubis and atlas, but also some new bone portions that preserve well in the archaeological record (e.g., distal tibia, distal metacarpal and metatarsal, and second phalanx). Surprisingly, two elements commonly used in sexing analyses (distal humerus and astragalus) were not among the most effective elements. Although cutting points and discriminant functions for sexing gazelle bone portions are presented here, they do not account for potential body size change and thus are not suited for direct application to archaeological assemblages. Instead, we provide guidelines for application to archaeological gazelle assemblages, most importantly a regression analysis that considers the sex ratios obtained from multiple measurements to predict the sex ratio of archaeological gazelle populations.     

Selection and Exploitation of Macro‐Vertebrate Resources During the Upper Palaeolithic in Northern Spain. New Evidence from Coímbre Cave (Peñamellera Alta,Asturias)

The exploitation of ungulates in the Cantabrian region during the Upper Palaeolithic is characterized by the appearance of progressively specialized hunting strategies, especially during the Magdalenian. This specialization focused on either Iberian ibex or red deer, depending on environmental or topographic features. Red deer, for instance, was hunted mostly on the plains while ibex and/or chamois was hunted in rocky and mountainous areas. Here we present new zooarchaeological and taphonomic evidence from Coímbre cave (northern Spain), a site located in the rugged region between the Picos de Europa and Sierra del Cuera (Asturias) which has evidence for specialized ibex hunting. We discuss the possible reasons for such a selective hunting pattern. While the predominance of mountain species such as Iberian ibex or chamois in the Magdalenian levels suggests prey selection based on topographic or environmental criteria, the predominance of large bovids in the Gravettian level could imply that other alternatives were available. We also provide evidence of a pattern of rabbit exploitation which is unusual by comparison with other Upper Palaeolithic sites of northern Spain, and which taphonomic evidence suggests was due to human activity.     

Upper paleolithic ibex hunting in southwest Europe

Beginning in the Solutrean period (c. 20,000 bp) and extending through the Azilian period (c. 10,000 bp), ibex (Capra pyrenaica) hunting was a significant part of intensive terminal Paleolithic subsistence strategies in Cantabrian Spain and along the French Pyrenees. There are several totally specialized ibex-hunting sites, as well as ibex-dominated layers at sites used for other purposes at other times. Some of these sites (i.e. La Riera, Rascaño, Ekain, Erralla, Les Eglises, Balma Margineda) have been excavated recently, and the faunas have been analyzed by J. Altuna, F. Delpech, and D. Geddes. The results, in combination with data from older excavations, are used to explore the tactics and seasonality of prehistoric ibex hunting and to suggest differences in terms of abandoned anatomical elements between sites located very close to kill spots in the ibex habitat (i.e. on steep, rocky slopes) and those which were located at some distance from the probable hunting locations. This analysis is based on the relative utility of different body parts proposed by L. R. Binford, while taking into account other factors such as biased bone preservation and the “schlepp effect”. It helps to refine our understanding of the logistical ibex procurement station as a fairly distinctive kind of prehistoric site in southwestern Europe.     

Uranium and thorium distributions in fossil bones from Olduvai Gorge,Tanzania and Kanam,Kenya

The micro-distributions of uranium and thorium have been studied in fossil bone cortices in samples from Olduvai Gorge, Tanzania and Kanam, Kenya, and compared with modern bones collected from the surface at Olduvai Gorge. Concentrations in excess of 800 ppm U and 200 ppm Th are recorded in sections of some fossil bones, whereas concentrations do not exceed 20 ppm U or 1 ppm Th in the modern bones. In fossil bones, Th has a larger intra-bone variation than U. The distribution profiles of the two elements across the fossil bone cortices are quite distinct and reflect differences in their geochemical behaviour in the supergene environment. In particular, the two possible oxidation states of U, compared with one for Th, allow U to be more mobile than Th, but also more susceptible to variations in the redox potential of the depositional environment. In some fossil bone samples secondary leaching of U has occurred, whereas Th is retained in the bone cortex. U is incorporated into fossil bone earlier than Th.     

The taphonomy and palaeoenvironmental implications of the small mammals from Karain Cave,Turkey

The small mammal accumulations in the Pleistocene deposits of Karain Cave are investigated to identify the predators and possible biases in the fossil assemblages. Seven small mammal assemblages are studied in chronological order from two chambers of the cave, the main chamber E and the side chamber B. The lowermost level within the whole sequence is Proto-Charentien, which corresponds to an early stage of the Middle Palaeolithic. The main part of the material belongs to Middle Palaeolithic layers. The most important aspect of the fossil record in the cave is the human occupation without any interruption through the Pleistocene to Holocene. The small mammal fossil evidence in the cave denotes the presence of opportunistic predators throughout the sequence with one exception, and these produce balanced samples of small mammal faunas in the habitat. The lack of bias in the small mammal faunas allow the interpretation of local environments, showing that partial steppe and arid conditions existed during deposition of the lowermost levels of the Middle Palaeolithic in Karain Cave and that these shifted into more temperate and wooded habitat in the upper levels. Evidence from the side chamber indicates some differences, with a more open grassy environment. In the Mediterranean part of Anatolia the temperate and moist conditions in the Middle Palaeolithic were superseded by more arid conditions in the Upper Palaeolithic, followed by a decrease in steppe conditions during the Epi-Palaeolithic period.     

Did Modern Human Dispersal Take a Coastal Route into India? New Evidence from Palaeolithic Surveys of Kachchh,Gujarat

The Indian Ocean coastline is argued to have been a critical route of modern human dispersal from Africa, introducing Late Palaeolithic industries into South Asia, but a dearth of evidence has prevented a direct evaluation of this. Kachchh (Gujarat, India), located immediately east of the Indus Delta, is an important setting to appraise the Palaeolithic occupation of the western Indian coastline. Targeted survey of Late Pleistocene sediments there found widespread evidence for occupation of Kachchh during the Late Pleistocene: Middle Palaeolithic and possibly Late Acheulean lithic artifacts. The conspicuous absence of Late Palaeolithic industries in these Late Pleistocene deposits, with their presence only noted in Holocene contexts, does not support the model of modern human expansions into India with these industries via the coastal route. We evaluate these results in the context of current debates regarding Late Pleistocene hominin demography, adaptation, and expansions.     

Radio – Ulnar Weight Index — is it a Useful Criterion for Sex Identification of the Human Skeleton?

Sex identification of human long bones has been studied by several investigators. Measurements of the radius and the ulna have also been reported as an indicator of sex by reference to separate parameters and/or to combinations of the parameters of a single bone. This study was designed to determine whether the radius and the ulna can provide reliable information for the sexing of human bones, as can the lower leg bones, if the forearm measurements include the weight index of the two bones as a parameter. The materials consisted of the dried radii and ulnae of 20 recently deceased Japanese males and 20 similar females. Almost all the dimensions exhibited statistically significant sex differences. The radio–ulnar weight index did not, however, differ between the sexes. In discriminant analysis, the rate of correct sex discrimination based on distances between various pairs of points was not improved by the inclusion of the radio–ulnar weight index. Therefore, the radio–ulnar weight index cannot be recommended as a parameter for the sexing of human bones.     

Fossil dogs and wolves from Palaeolithic sites in Belgium,the Ukraine and Russia: osteometry,ancient DNA and stable isotopes

Using multivariate techniques, several skulls of fossil large canids from sites in Belgium, Ukraine and Russia were examined to look for possible evidence of the presence of Palaeolithic dogs. Reference groups constituted of prehistoric dogs, and recent wolves and dogs. The fossil large canid from Goyet (Belgium), dated at c. 31,700 BP is clearly different from the recent wolves, resembling most closely the prehistoric dogs. Thus it is identified as a Palaeolithic dog, suggesting that dog domestication had already started during the Aurignacian. The Epigravettian Mezin 5490 (Ukraine) and Mezhirich (Ukraine) skulls are also identified as being Palaeolithic dogs. Selected Belgian specimens were analyzed for mtDNA and stable isotopes. All fossil samples yielded unique DNA sequences, indicating that the ancient Belgian large canids carried a substantial amount of genetic diversity. Furthermore, there is little evidence for phylogeographic structure in the Pleistocene large canids, as they do not form a homogenous genetic group. Although considerable variation occurs in the fossil canid isotope signatures between sites, the Belgian fossil large canids preyed in general on horse and large bovids.     

Sex identification from the distal fibula

This study was designed to determine whether the fibula, which is one of the least studied long bones, can provide reliable information for sexing of human bones, provided that one condition is satisfied, namely, its distal end is available for measurement. The materials consisted of the dried fibulae of 71 Japanese males and 35 females whose names, ages and sex were known. The distal end of the fibula was measured with respect to five novel dimensions that are closely related to the soft tissues that had been attached to the bone surface. Highly significant sex differences were found when all parameters examined were considered together. The differences for separate items were not, however, sufficient for sex discrimination. Discriminant analysis was performed using the five parameters and yielded the correct sex with 90. 6 per cent accuracy for the entire group of specimens. This degree of accuracy suggests the utility of the present method for sexing human bones, in particular, in osteoarchaeological situations.     

The conundrum of castration in the archaeological record: An interpretation of Roman cattle horn-cores from Chelmsford,Essex

Current methods of sexing archaeological cattle bones, in particular the metapodials, are based upon past research into contemporary breeds and this work embraces a limited sample size, spread across a vast geographical area. Although the separation of cows and bulls is not in question, there appears a great deal of subjectivity in the literature concerning the identification of castrated beasts. Living bone is in a dynamic state of equilibrium with the rest of the body and responds to increased loading, that is, an increase in weight of the beast or stress/strain through strenuous movement, by remodelling. If cows and oxen are performing the same work, as for example in ploughing, then loading on the bones will be similar. These bones will thus respond by remodelling in corresponding fashion, and hence any morphological and metrical distinctions will be clouded. Horn-cores are less subject to these constraints, although in some cultures there may be loading on these bones, for example through attaching the harness to the horns for ploughing. The Chelmsford cattle horn-cores constitute waste from some industrial activity and it is argued in the text that horn-working is the most likely candidate, together with possibly tanning. Sexing of the bones strongly indicated male animals, with few females being present. A procedure for detecting castrated cattle (oxen) is presented, the results of which suggest an equivalent ratio of oxen to bulls.     

Human consumption of tortoises at Level IV of Bolomor Cave (Valencia, Spain)

The acquisition and consumption of small prey in the pre-Upper Palaeolithic is a highly debated topic at present. For some authors, the systematic obtaining of these animals is only part of the subsistence strategies used by anatomically modern Humans. However, the consumption of small prey dates back to the Plio-Pleistocene chronologies in some sites. Although the utilization of leporids has been recorded in several pre-Late Pleistocene European sites, the evidence of tortoise consumption is documented not as common for these periods. However, Level IV of Bolomor Cave has clear diagnostic elements to document the acquisition and use of tortoises (Testudo hermanni) for food in the form of: (1) cutmarks on limb bones and ventral surface of the carapace and plastron; (2) presence of burning on tortoise skeleton and shell; (3) elements of anthropogenic breakage on carapace and plastron: percussion pits, percussion notches and impact flakes; and (4) human toothmarks on limb bones. This paper tries to examine the possible patterns in the tortoise consumption sequence from Level IV of Bolomor Cave and improves data on the butchery process and tortoise consumption in the Late Middle Pleistocene.     

Site function and the ‘ibex-site phenomenon’: myth or reality?

Summary.  This paper focuses on ibex hunting in Italy during the Upper Palaeolithic. The faunal assemblages from five ibex-dominated sites (Dalmeri, Arene Candide, Fumane, Villabruna and Soman) are examined with the aim of assessing the role of the sites and people's activities in the wider settlement system. These sites will be placed in their wider context of the Italian Upper Palaeolithic so as to explore the nature of variability in ibex exploitation. The importance of these considerations is to examine aspects of specialized hunting, increased intensity of resource exploitation during the end of the Upper Palaeolithic, and methodological considerations of the relationship between faunal remains and the human activities that produced them.     

Radiographic evidence for changing patterns of animal exploitation in the Southern levant

Radiographs were taken of sheep (Ovis aries) and goat (Capra hircus) metacarpals from archaeological sites in Israel dating from the Pre-Pottery Neolithic B (PPNB) to recent times. From these radiographs the combined cortical thickness (CCT) of the bones was measured, and used to estimate sample variation in bone mass. The samples were compared by species and period, and further compared with CCT values obtained for a recent sample of ibex (Capra ibex nubiana) from the same region. For all periods studied, CCT values in goats were comparable with those of recent ibex. A significant reduction in CCT values of both sheep and goats was found in the Early Bronze to recent samples as compared with the Chalcolithic and PPNB samples. It is proposed that this reduction in CCT values is associated with the presence of older, female animals in the later samples studied, and may be indicative of an emphasis on milk herds.     

A DNA test for sex identification in cattle confirms osteometric results

It is of vital importance to be able to sex identify cattle remains to understand the strategies and importance of cattle husbandry in an ancient society. This is usually done from osteoarchaeological assemblages and often relies on measurements of metapodials. The breadth measurement of the distal trochlea is considered an easy way to identify the sex. Bones from males appears to be easily distinguishable from female counterparts, although it has been complicated to find an external control for the morphological results. Here we investigate the reliability of these particular morphometrics for sex identifying cattle bones with molecular genetics. We use a sex discriminating single nucleotide polymorphism in the ZFXY gene and we apply it to DNA from the bones. To keep the fragment size short and suitable for ancient DNA we base the test on a SNP. The test confirms the osteological sex identification in all cases were DNA could be retrieved. This molecular method can also be used when no fragments suitable for osteological sex identification can be found or when the measurements are non-conclusive.     

Diameter of the human internal acoustic meatus and sex determination

We report the results of testing the diameter of the internal opening of the acoustic canal in the petrous part of the temporal bone for sex determination of skeletal remains. The method involves measuring the diameter using a suite of ordinary drills. The method is very simple and has the great advantage of utilising one of the sturdiest bone elements of the human skeleton. The method may be especially useful for the analyses of very fragmented skeletal remains or cremated bones, where the petrous bone may still be readily recognisable. The method was tested using a forensic sample of 113 left petrous bones with known sex. Intra‐ and inter‐observer testing was also performed. We found a statistically significant difference in diameter between males and females (means: males: 3.7 mm; females: 3.4 mm; P < 0.009). However, the low predictive value (70%) for correct sexing using two sectioning points ( < 3.0 mm = female; >3.5 mm = male) was disappointing. No additional accuracy was gained by employing both left and right petrous bones (a bilateral sample of 60 petrous bones was also tested), although left and right side diameter is highly correlated (R = 0.778; P = 0.0001). Copyright © 2005 John Wiley & Sons, Ltd.